Affymetrix canine annotation data (chip canine)

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Documentation for package ‘canine.db’ version 2.4.5

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canine Bioconductor annotation data package
canine.db Bioconductor annotation data package
canineACCNUM Map Manufacturer identifiers to Accession Numbers
canineALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
canineCHR Map Manufacturer IDs to Chromosomes
canineCHRLENGTHS A named vector for the length of each of the chromosomes
canineCHRLOC Map Manufacturer IDs to Chromosomal Location
canineCHRLOCEND Map Manufacturer IDs to Chromosomal Location
canineENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
canineENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
canineENTREZID Map between Manufacturer Identifiers and Entrez Gene
canineENZYME Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
canineENZYME2PROBE Map between Enzyme Commission Numbers and Manufacturer Identifiers
canineGENENAME Map between Manufacturer IDs and Genes
canineGO Map between Manufacturer IDs and Gene Ontology (GO)
canineGO2ALLPROBES Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
canineGO2PROBE Map between Gene Ontology (GO) and Manufacturer Identifiers
canineLOCUSID Map between Manufacturer Identifiers and Entrez Gene
canineMAPCOUNTS Number of mapped keys for the maps in package canine.db
canineORGANISM The Organism information for canine
canineORGPKG The Organism information for canine
caninePATH Mappings between probe identifiers and KEGG pathway identifiers
caninePATH2PROBE Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
caninePMID Map between Manufacturer Identifiers and PubMed Identifiers
caninePMID2PROBE Map between PubMed Identifiers and Manufacturer Identifiers
canineREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
canineSYMBOL Map between Manufacturer Identifiers and Gene Symbols
canineUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
canineUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
canineUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
canine_dbconn Collect information about the package annotation DB
canine_dbfile Collect information about the package annotation DB
canine_dbInfo Collect information about the package annotation DB
canine_dbschema Collect information about the package annotation DB